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 | Acesso ao texto completo restrito à biblioteca da Embrapa Mandioca e Fruticultura. Para informações adicionais entre em contato com cnpmf.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Mandioca e Fruticultura. |
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Data corrente: |
12/07/2013 |
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Data da última atualização: |
19/05/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
PASSOS, M. A. N.; CRUZ, V. de O.; EMEDIATO, F. L.; TEIXEIRA, C. de C.; SOUZA JR. M. L T.; MATSUMOTO, T.; AZEVEDO, V. C. R.; FERREIRA, C. F.; AMORIM, E. P.; FIGUEIREDO, L. F. de A.; MARTINS, N. F.; CAVALCANTE, M. de J. B.; BAURENS, F.-C.; SILVA JUNIOR, O. B. da; PAPPAS JUNIOR, G. J.; PIGNOLET, L.; ABADIE, C.; CIAMPI, A. Y.; PIFFANELLI, P.; MILLER, R. N. G. |
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Afiliação: |
MARCO A. N. PASSOS, UNB; VIVIANE DE OLIVEIRA CRUZ, UNB; FLAVIA L. EMEDIATO, UNB; CRISTIANE DE CAMARGO TEIXEIRA, UCB; MANOEL T. SOUZA JR., UCB; TAKASHI MATSUMOTO, National Institute of Agrobiological Resources; VANIA CRISTINA RENNO AZEVEDO, CENARGEN; CLAUDIA FORTES FERREIRA, CNPMF; EDSON PERITO AMORIM, CNPMF; LUCIO FLAVIO DE ALENCAR FIGUEIREDO, UNB; NATALIA FLORENCIO MARTINS, CENARGEN; MARIA DE JESUS BARBOSA CAVALCANTE, DPD; FRANC-CHRISTOPHE BAURENS, CIRAD; ORZENIL BONFIM DA SILVA JUNIOR, CENARGEN; GEORGIOS JOANNIS PAPPAS JUNIOR, CENARGEN; LUC PIGNOLET, CIRAD; CATHERINE ABADIE, CIRAD; ANA Y. CIAMPI; PIETRO PIFFANELLI, Genomics Platform at Parco Tecnologico Padano; ROBERT N.G. MILLER, UNB. |
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Título: |
Development of expressed sequence tag and EST-SSR marker resources for Musa acuminata. |
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Ano de publicação: |
2012 |
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Fonte/Imprenta: |
AOB Plants, 2012. |
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ISSN: |
2041-2851 |
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Idioma: |
Inglês |
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Notas: |
(Open Access). |
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Conteúdo: |
Background and aims: Banana (Musa acuminata) is a crop contributing to global food security. Many varieties lack resistance to biotic stresses, due to sterility and narrow genetic background. The objective of this study was to develop an expressed sequence tag (EST) database of transcripts expressed during compatible and incompatible banana-Mycosphaerella fijiensis (Mf) interactions. Black leaf streak disease (BLSD), caused by Mf, is a destructive disease of banana. Microsatellite markers were developed as a resource for crop improvement. Methodology: cDNA libraries were constructed from in vitro-infected leafes from BLSD-resistant M. acuminata ssp. burmaniccoides Calcutta 4 (MAC4) and susceptible M. acuminata cv. Cavendish Grande Naine (MACV). Clones were 5´end Sanger sequenced, ESTs assembled with TGICL and unigenes annotated using BLAST, Blast2GO and InterProScan. Mreps was used to screen for simple sequence repeats (SSRs), with markers evaluated for polymorphism using twenty diploid (AA) M. acuminata accessions contrasting in resistance to Mycosphaerella leaf spot diseases. Principal results: A total of 9333 high quality ESTs were obtained for MAC4 and 3964 for MACV, which assembled into 3995 unigenes. Of these, 2592 displayed homology to genes encoding proteins with known or putative function, and 266 to genes encoding proteins with unknown function. Gene ontology (GO) classification identified 543 GO terms, 2300 unigenes were assigned to EuKaryotic Orthologous Groups (KOG) categories and 312 mapped to KEGG pathways. A total of 624 SSR loci were identified, with trinucleotide repeat motifs the most abundant in MAC4 (54.1%) and MACV Downloaded from http://aobpla.oxfordjournals.org/ at Empresa Brasileira de Pesquisa Agropecuária on July 12, 2013 4 (57.6%). Polymorphism across M. acuminata accessions was observed with 75 markers. Alleles per polymorphic locus ranged from 2 to 8, totaling 289. Polymorphism information content (PIC) ranged from 0.08 to 0.81. Conclusions: This EST collection offers a resource for studying functional genes, including transcripts expressed in banana-Mf interactions. Markers are applicable for genetic mapping, diversity characterization and marker assisted breeding. MenosBackground and aims: Banana (Musa acuminata) is a crop contributing to global food security. Many varieties lack resistance to biotic stresses, due to sterility and narrow genetic background. The objective of this study was to develop an expressed sequence tag (EST) database of transcripts expressed during compatible and incompatible banana-Mycosphaerella fijiensis (Mf) interactions. Black leaf streak disease (BLSD), caused by Mf, is a destructive disease of banana. Microsatellite markers were developed as a resource for crop improvement. Methodology: cDNA libraries were constructed from in vitro-infected leafes from BLSD-resistant M. acuminata ssp. burmaniccoides Calcutta 4 (MAC4) and susceptible M. acuminata cv. Cavendish Grande Naine (MACV). Clones were 5´end Sanger sequenced, ESTs assembled with TGICL and unigenes annotated using BLAST, Blast2GO and InterProScan. Mreps was used to screen for simple sequence repeats (SSRs), with markers evaluated for polymorphism using twenty diploid (AA) M. acuminata accessions contrasting in resistance to Mycosphaerella leaf spot diseases. Principal results: A total of 9333 high quality ESTs were obtained for MAC4 and 3964 for MACV, which assembled into 3995 unigenes. Of these, 2592 displayed homology to genes encoding proteins with known or putative function, and 266 to genes encoding proteins with unknown function. Gene ontology (GO) classification identified 543 GO terms, 2300 unigenes were assigned to EuKaryotic Orthologous Groups (... Mostrar Tudo |
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Palavras-Chave: |
Melhoramento genético. |
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Thesagro: |
Banana; Melhoramento vegetal; Musa Acuminata. |
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Thesaurus Nal: |
Bananas; Breeding; Genetic improvement. |
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Categoria do assunto: |
G Melhoramento Genético |
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Marc: |
LEADER 03489naa a2200457 a 4500
001 1961997
005 2023-05-19
008 2012 bl uuuu u00u1 u #d
022 $a2041-2851
100 1 $aPASSOS, M. A. N.
245 $aDevelopment of expressed sequence tag and EST-SSR marker resources for Musa acuminata.$h[electronic resource]
260 $c2012
500 $a(Open Access).
520 $aBackground and aims: Banana (Musa acuminata) is a crop contributing to global food security. Many varieties lack resistance to biotic stresses, due to sterility and narrow genetic background. The objective of this study was to develop an expressed sequence tag (EST) database of transcripts expressed during compatible and incompatible banana-Mycosphaerella fijiensis (Mf) interactions. Black leaf streak disease (BLSD), caused by Mf, is a destructive disease of banana. Microsatellite markers were developed as a resource for crop improvement. Methodology: cDNA libraries were constructed from in vitro-infected leafes from BLSD-resistant M. acuminata ssp. burmaniccoides Calcutta 4 (MAC4) and susceptible M. acuminata cv. Cavendish Grande Naine (MACV). Clones were 5´end Sanger sequenced, ESTs assembled with TGICL and unigenes annotated using BLAST, Blast2GO and InterProScan. Mreps was used to screen for simple sequence repeats (SSRs), with markers evaluated for polymorphism using twenty diploid (AA) M. acuminata accessions contrasting in resistance to Mycosphaerella leaf spot diseases. Principal results: A total of 9333 high quality ESTs were obtained for MAC4 and 3964 for MACV, which assembled into 3995 unigenes. Of these, 2592 displayed homology to genes encoding proteins with known or putative function, and 266 to genes encoding proteins with unknown function. Gene ontology (GO) classification identified 543 GO terms, 2300 unigenes were assigned to EuKaryotic Orthologous Groups (KOG) categories and 312 mapped to KEGG pathways. A total of 624 SSR loci were identified, with trinucleotide repeat motifs the most abundant in MAC4 (54.1%) and MACV Downloaded from http://aobpla.oxfordjournals.org/ at Empresa Brasileira de Pesquisa Agropecuária on July 12, 2013 4 (57.6%). Polymorphism across M. acuminata accessions was observed with 75 markers. Alleles per polymorphic locus ranged from 2 to 8, totaling 289. Polymorphism information content (PIC) ranged from 0.08 to 0.81. Conclusions: This EST collection offers a resource for studying functional genes, including transcripts expressed in banana-Mf interactions. Markers are applicable for genetic mapping, diversity characterization and marker assisted breeding.
650 $aBananas
650 $aBreeding
650 $aGenetic improvement
650 $aBanana
650 $aMelhoramento vegetal
650 $aMusa Acuminata
653 $aMelhoramento genético
700 1 $aCRUZ, V. de O.
700 1 $aEMEDIATO, F. L.
700 1 $aTEIXEIRA, C. de C.
700 1 $aSOUZA JR. M. L T.
700 1 $aMATSUMOTO, T.
700 1 $aAZEVEDO, V. C. R.
700 1 $aFERREIRA, C. F.
700 1 $aAMORIM, E. P.
700 1 $aFIGUEIREDO, L. F. de A.
700 1 $aMARTINS, N. F.
700 1 $aCAVALCANTE, M. de J. B.
700 1 $aBAURENS, F.-C.
700 1 $aSILVA JUNIOR, O. B. da
700 1 $aPAPPAS JUNIOR, G. J.
700 1 $aPIGNOLET, L.
700 1 $aABADIE, C.
700 1 $aCIAMPI, A. Y.
700 1 $aPIFFANELLI, P.
700 1 $aMILLER, R. N. G.
773 $tAOB Plants, 2012.
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Embrapa Mandioca e Fruticultura (CNPMF) |
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| Registros recuperados : 26 | |
| 1. |  | DIAS, J. A.; FREIRE, A. L. F.; GIROTTO, I.; DEL ROVERI, C.; MASTELARO, V. R.; PARIS, E. C.; GIRALDI, T. R. Phase evolution and optical properties of nanometric Mn-doped TiO2 pigments. Materials Today Communications, v. 27, e102295, 2021. 1-12| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Instrumentação. |
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| 2. | | FERREIRA, M. A.; SILVA, G. T. S. T. da; LOPES, O. F.; MASTELARO, V. R.; RIBEIRO, C.; PIRES, M. J. M.; MALAGUTTI, A. R.; AVANSI JR, W.; MOURÃO, H. A. J. L. Fabrication of SrTiO3/g-C3N4 heterostructures for visible light-induced photocatalysis. Materials Science in Semiconductor Processing, n. 108, a. 104887, 2020. 1-10| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Instrumentação. |
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| 3. | | MOREIRA, A. J.; MALAFATTI, J. O. D.; GIRALDI, T. R.; PARIS, E. C.; PEREIRA, E. C.; MENDONÇA, V. R.; MASTELARO, V. R.; FRESCHI, G. P. G. Prozac® photodegradation mediated by Mn-doped TiO2 nanoparticles: Evaluation of by-products and mechanisms proposal. Journal of Environmental Chemical Engineering, v. 8, 104543, 2020. 1 - 13| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Instrumentação. |
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| 5. | | SILVA, G. T. S. T.; CARVALHO, K. T. G.; LOPES, O. F.; GOMES, E. S.; MALAGUTTI, A. R.; MASTELARO, V. R.; OLIVEIRA, C. R. de; MOURÃO, H. A. J. L. Assisted synthesis of ZnO nanoparticles for photocatalysis application. In: BRAZILIAN MRS MEETING, 16., 2017, Gramado, RS. [Anais ...]. [S.l.]: SBPMat, 2017. 308-309| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Instrumentação. |
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| 6. | | MOURÃO, H. A. J. L.; LOPES, O. F.; AVANSI JUNIOR, W.; PIRES, M. J. M.; SOUZA, S.; OLIVEIRA, C. R. de; MASTELARO, V. R. SrTi1 - yFeyO3 samples obtained by hydrothermal method: The effect of the amount of Fe on structural and photocatalytic properties. In: Materials Science in Semiconductor Processing, v. 68, p. 140-146, 2017.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Instrumentação. |
|  |
| 7. | | SILVA, G. T. S. T.; CARVALHO, K. T. G.; LOPES, O. F.; GOMES, E. S.; MALAGUTTI, A. R.; MASTELARO, V. R.; OLIVEIRA, C. R. de; MOURÃO, H. A. J. L. Synthesis of ZnO nanoparticles assisted br N sources and their application in the photodegradation of organic contaminants. In:ChemCatChem, v. 9, p. 3795-3804, 2017.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Instrumentação. |
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| 8. | | SILVA, L. F.; M'PEKO, J.-C.; CATTO, A. C.; BERNARDINI, S.; MASTELARO, V. R.; OLIVEIRA, C. R. de; LONGO, E. UV-enhanced ozone sensing response of ZnO-SnO2[subscrito] heterojunctions at room temperature. In: Sensor and Actuators. B, Chemical, n. 240, p. 573-579, 2017.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Instrumentação. |
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| 10. | | SILVA, L. F. da; LOPES, O. F.; MENDONÇA, V. R. de; CARVALHO, K. T. G.; LONGO, E.; RIBEIRO, C.; MASTELARO, V. R. An understanding of the photocatalytic properties and pollutant degradation mechanism of SrTiO3 nanoparticles. [3 é subscrito]. Photochemistry and Photobiology, [S. l.], v. 92, p. 371-378, 2016.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Instrumentação. |
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| 12. | | CATTO, A. C.; SILVA, L. F. da; RIBEIRO, C.; BERNARDINI, S.; AGUIR, K.; LONGO, E.; MASTELARO, V. R. An easy method of preparing ozone gas sensors based on ZnO nanorods. RSC Advances, [S. l.], v. 5, p. 19528-19533, 2015.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Instrumentação. |
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| 13. | | ALMEIDA, J. M. P.; TRIBUZI, V.; FONSECA, R. D.; OTUKA, A. J. G.; FERREIRA, P. H. D.; MASTELARO, V. R.; BRAJATO, P.; HERNANDES, A. C.; DEV, A.; VOSS, T.; CORREA, D. S.; MENDONÇA, C. R. Femtosecond laser processing of glassy and polymeric matrices containing metals and semiconductor nanostructures. Optical Materials, Amsterdam, v. 35, n. 12, p. 2643-2648, 2013.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Instrumentação. |
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| 14. | | OLIVEIRA, L. H.; PARIS, E. C.; AVANSI, W.; RAMIREZ, M. A.; MASTELARO, V. R.; LONGO, E.; VARELA, J. A. Correlation between photoluminescence and structural defects in Ca1+xCu3-xTi4O12 systems. Journal of the American Ceramic Society, Westerville, v. 96, n. 1, p. 209-217, 2013.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Instrumentação. |
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| 15. | | SILVA, L. F. da; AVANSI JR, W.; ANDRÉS, J.; RIBEIRO, C.; MOREIRA, M. L.; LONGO, E.; MASTELARO, V. R. Long-range and short-range structures of cube-like shape SrTiO3 powders: microwave-assisted hydrothermal synthesis and photocatalytic activity. Physical Chemistry Chemical Physics, Cambridge, v. 15, n. 29, p. 12386-12393, 2013.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Instrumentação. |
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| 18. | | FIGUEIREDO, A.; VIEIRA, N. C. S; AVANSI, W.; OLIVEIRA, C. R. de; MASTELARO, V. R.; ZUCOLOTTO, V.; GUIMARÃES, F. E. G. Multicomposites of Dendrimers and vanadium pentoxide nanostructures: application as pH sensors. In: ENCONTRO DA SBPMAT, 10.; BRAZILIAN MRS MEETING, 10., 2011, Gramado. Resumos... Rio de Janeiro: SBPMat, 2011. não paginado.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Instrumentação. |
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| 20. | | AVANSI, W.; MENDONÇA, V. R. de; MAIA, L. J. Q.; OLIVEIRA, C. R. de; LONGO, E.; MASTELARO, V. R. Vanadium pentoxide nanostrucutres: optical properties and visible-light photocatalytic performance. In: ENCONTRO DA SBPMAT, 10.; BRAZILIAN MRS MEETING, 10., 2011, Gramado. Resumos... Rio de Janeiro: SBPMat, 2011. não paginado.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Instrumentação. |
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| Registros recuperados : 26 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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